A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2022-11-17, 16:42 EST
based on data in:
/home/e1garcia/shotgun_PIRE/pire_cssl_data_processing/gazza_minuta/2nd_sequencing_run/fq_fp1_clmp_fp2
General Statistics
Showing 245/245 rows and 4/6 columns.| Sample Name | % Duplication | GC content | % PF | % Adapter |
|---|---|---|---|---|
| Gmi-ABas_001-Ex1-b-cssl2.clmp.r1r2_fastp | 16.0% | 52.4% | 98.6% | 1.0% |
| Gmi-ABas_003-Ex1-b-cssl2.clmp.r1r2_fastp | 10.1% | 48.3% | 98.9% | 1.1% |
| Gmi-ABas_004-Ex1-b-cssl2.clmp.r1r2_fastp | 11.0% | 50.6% | 98.9% | 1.1% |
| Gmi-ABas_008-Ex1-b-cssl.clmp.r1r2_fastp | 22.9% | 68.0% | 98.6% | 0.3% |
| Gmi-ABas_009-Ex1-b-cssl.clmp.r1r2_fastp | 8.5% | 46.9% | 99.0% | 1.0% |
| Gmi-ABas_010-Ex1-b-cssl.clmp.r1r2_fastp | 9.2% | 46.7% | 99.0% | 1.0% |
| Gmi-ABas_011-Ex1-b-cssl.clmp.r1r2_fastp | 13.8% | 52.4% | 98.8% | 0.9% |
| Gmi-ABas_012-Ex1-b-cssl.clmp.r1r2_fastp | 10.8% | 49.0% | 98.8% | 1.1% |
| Gmi-ABas_013-Ex1-b-cssl.clmp.r1r2_fastp | 15.7% | 49.3% | 98.8% | 0.9% |
| Gmi-ABas_014-Ex1-b-cssl.clmp.r1r2_fastp | 9.7% | 47.5% | 98.8% | 1.2% |
| Gmi-ABas_015-Ex1-b-cssl.clmp.r1r2_fastp | 10.6% | 46.4% | 98.9% | 1.1% |
| Gmi-ABas_016-Ex1-b-cssl.clmp.r1r2_fastp | 15.0% | 50.2% | 98.8% | 0.9% |
| Gmi-ABas_017-Ex1-b-cssl2.clmp.r1r2_fastp | 8.3% | 45.2% | 98.9% | 1.1% |
| Gmi-ABas_018-Ex1-b-cssl2.clmp.r1r2_fastp | 7.3% | 42.9% | 99.0% | 1.1% |
| Gmi-ABas_019-Ex1-b-cssl2.clmp.r1r2_fastp | 7.6% | 44.3% | 99.1% | 1.2% |
| Gmi-ABas_022-Ex1-b-cssl2.clmp.r1r2_fastp | 6.9% | 42.7% | 99.1% | 1.2% |
| Gmi-ABas_024-Ex1-b-cssl.clmp.r1r2_fastp | 10.3% | 47.4% | 98.8% | 1.1% |
| Gmi-ABas_025-Ex1-b-cssl.clmp.r1r2_fastp | 7.9% | 44.0% | 98.6% | 1.5% |
| Gmi-ABas_026-Ex1-b-cssl.clmp.r1r2_fastp | 12.4% | 46.2% | 98.1% | 1.4% |
| Gmi-ABas_027-Ex1-b-cssl.clmp.r1r2_fastp | 11.7% | 45.4% | 98.0% | 1.4% |
| Gmi-ABas_028-Ex1-b-cssl2.clmp.r1r2_fastp | 10.2% | 44.5% | 98.3% | 1.3% |
| Gmi-ABas_029-Ex1-b-cssl.clmp.r1r2_fastp | 12.9% | 46.7% | 98.1% | 1.3% |
| Gmi-ABas_030-Ex1-b-cssl2.clmp.r1r2_fastp | 15.3% | 48.6% | 98.2% | 1.2% |
| Gmi-ABas_031-Ex1-b-cssl.clmp.r1r2_fastp | 12.2% | 46.4% | 98.1% | 1.5% |
| Gmi-ABas_032-Ex1-b-cssl.clmp.r1r2_fastp | 12.2% | 46.4% | 98.4% | 1.4% |
| Gmi-ABas_033-Ex1-b-cssl2.clmp.r1r2_fastp | 11.8% | 46.2% | 98.3% | 1.6% |
| Gmi-ABas_034-Ex1-b-cssl2.clmp.r1r2_fastp | 8.4% | 44.4% | 98.4% | 1.7% |
| Gmi-ABas_035-Ex1-b-cssl2.clmp.r1r2_fastp | 17.9% | 50.3% | 98.4% | 1.1% |
| Gmi-ABas_036-Ex1-b-cssl.clmp.r1r2_fastp | 10.7% | 45.2% | 98.5% | 1.3% |
| Gmi-ABas_037-Ex1-b-cssl.clmp.r1r2_fastp | 9.3% | 44.3% | 98.4% | 1.4% |
| Gmi-ABas_038-Ex1-b-cssl.clmp.r1r2_fastp | 12.4% | 47.7% | 98.5% | 1.4% |
| Gmi-ABas_039-Ex1-b-cssl.clmp.r1r2_fastp | 13.6% | 47.4% | 98.5% | 1.3% |
| Gmi-ABas_040-Ex1-b-cssl.clmp.r1r2_fastp | 11.8% | 45.3% | 98.3% | 1.6% |
| Gmi-ABas_041-Ex1-b-cssl.clmp.r1r2_fastp | 14.0% | 46.8% | 98.3% | 1.5% |
| Gmi-ABas_042-Ex1-b-cssl.clmp.r1r2_fastp | 9.8% | 44.2% | 98.4% | 1.5% |
| Gmi-ABas_043-Ex1-b-cssl.clmp.r1r2_fastp | 14.3% | 46.5% | 98.4% | 1.3% |
| Gmi-ABas_045-Ex1-b-cssl2.clmp.r1r2_fastp | 9.2% | 28.7% | 99.0% | 1.1% |
| Gmi-ABas_046-Ex1-b-cssl.clmp.r1r2_fastp | 11.7% | 45.9% | 98.5% | 1.3% |
| Gmi-ABas_047-Ex1-b-cssl2.clmp.r1r2_fastp | 8.4% | 43.2% | 98.4% | 1.5% |
| Gmi-ABas_048-Ex1-b-cssl.clmp.r1r2_fastp | 14.3% | 47.4% | 98.3% | 1.4% |
| Gmi-ABas_049-Ex1-b-cssl2.clmp.r1r2_fastp | 10.7% | 29.4% | 98.8% | 1.1% |
| Gmi-ABas_050-Ex1-b-cssl.clmp.r1r2_fastp | 14.9% | 45.5% | 98.1% | 1.4% |
| Gmi-ABas_051-Ex1-b-cssl.clmp.r1r2_fastp | 15.2% | 46.0% | 98.1% | 1.4% |
| Gmi-ABas_052-Ex1-b-cssl.clmp.r1r2_fastp | 14.1% | 45.0% | 98.1% | 1.4% |
| Gmi-ABas_053-Ex1-b-cssl.clmp.r1r2_fastp | 10.7% | 43.7% | 98.1% | 1.5% |
| Gmi-ABas_055-Ex1-b-cssl2.clmp.r1r2_fastp | 13.4% | 44.9% | 98.2% | 1.4% |
| Gmi-ABas_056-Ex1-b-cssl.clmp.r1r2_fastp | 10.8% | 44.2% | 98.1% | 1.6% |
| Gmi-ABas_057-Ex1-b-cssl.clmp.r1r2_fastp | 15.6% | 46.7% | 98.1% | 1.5% |
| Gmi-ABas_058-Ex1-b-cssl2.clmp.r1r2_fastp | 9.1% | 43.8% | 98.3% | 1.7% |
| Gmi-ABas_059-Ex1-b-cssl2.clmp.r1r2_fastp | 8.6% | 44.7% | 98.2% | 1.7% |
| Gmi-ABas_060-Ex1-b-cssl2.clmp.r1r2_fastp | 8.3% | 40.7% | 98.4% | 1.5% |
| Gmi-ABas_061-Ex1-b-cssl.clmp.r1r2_fastp | 10.1% | 45.5% | 98.2% | 1.6% |
| Gmi-AHam_001-Ex1-cssl2.clmp.r1r2_fastp | 8.1% | 45.7% | 99.0% | 0.9% |
| Gmi-AHam_002-Ex1-cssl2.clmp.r1r2_fastp | 11.7% | 49.0% | 98.6% | 1.0% |
| Gmi-AHam_005-Ex1-cssl.clmp.r1r2_fastp | 12.8% | 50.9% | 98.9% | 1.0% |
| Gmi-AHam_006-Ex1-cssl.clmp.r1r2_fastp | 11.7% | 30.3% | 99.1% | 1.0% |
| Gmi-AHam_007-Ex1-cssl.clmp.r1r2_fastp | 15.0% | 40.2% | 99.1% | 1.3% |
| Gmi-AHam_008-Ex1-cssl.clmp.r1r2_fastp | 8.2% | 33.0% | 99.1% | 1.1% |
| Gmi-AHam_009-Ex1-cssl.clmp.r1r2_fastp | 8.6% | 37.2% | 98.9% | 1.1% |
| Gmi-AHam_012-Ex1-cssl.clmp.r1r2_fastp | 8.5% | 47.0% | 99.0% | 1.1% |
| Gmi-AHam_013-Ex1-cssl2.clmp.r1r2_fastp | 11.8% | 45.1% | 98.7% | 1.0% |
| Gmi-AHam_015-Ex1-cssl2.clmp.r1r2_fastp | 20.6% | 42.0% | 98.8% | 0.8% |
| Gmi-AHam_016-Ex1-cssl2.clmp.r1r2_fastp | 9.3% | 39.8% | 99.1% | 1.2% |
| Gmi-AHam_019-Ex1-cssl.clmp.r1r2_fastp | 8.3% | 43.5% | 99.1% | 1.1% |
| Gmi-AHam_020-Ex1-cssl.clmp.r1r2_fastp | 7.5% | 44.5% | 99.1% | 1.2% |
| Gmi-AHam_021-Ex1-cssl.clmp.r1r2_fastp | 9.2% | 43.7% | 99.0% | 1.1% |
| Gmi-AHam_022-Ex1-cssl.clmp.r1r2_fastp | 7.9% | 44.1% | 99.1% | 0.9% |
| Gmi-AHam_023-Ex1-cssl.clmp.r1r2_fastp | 13.2% | 51.3% | 98.8% | 0.9% |
| Gmi-AHam_024-Ex1-cssl.clmp.r1r2_fastp | 9.9% | 40.2% | 99.1% | 1.2% |
| Gmi-AHam_025-Ex1-cssl.clmp.r1r2_fastp | 7.4% | 43.0% | 99.1% | 1.1% |
| Gmi-AHam_034-Ex1-cssl.clmp.r1r2_fastp | 15.7% | 42.0% | 99.0% | 1.2% |
| Gmi-AHam_036-Ex1-cssl.clmp.r1r2_fastp | 10.0% | 40.5% | 99.0% | 1.3% |
| Gmi-AHam_038-Ex1-cssl.clmp.r1r2_fastp | 7.4% | 43.8% | 99.1% | 1.1% |
| Gmi-AHam_040-Ex1-cssl.clmp.r1r2_fastp | 8.9% | 32.3% | 98.9% | 1.1% |
| Gmi-AHam_043-Ex1-cssl.clmp.r1r2_fastp | 7.0% | 34.3% | 99.1% | 1.1% |
| Gmi-AHam_044-Ex1-cssl.clmp.r1r2_fastp | 8.4% | 41.0% | 99.1% | 1.3% |
| Gmi-AHam_045-Ex1-cssl.clmp.r1r2_fastp | 8.4% | 40.3% | 99.0% | 1.3% |
| Gmi-AHam_046-Ex1-cssl.clmp.r1r2_fastp | 8.2% | 40.0% | 99.1% | 1.2% |
| Gmi-AHam_047-Ex1-cssl.clmp.r1r2_fastp | 12.6% | 31.0% | 99.1% | 1.0% |
| Gmi-AHam_048-Ex1-cssl.clmp.r1r2_fastp | 13.6% | 39.0% | 99.1% | 1.3% |
| Gmi-AHam_049-Ex1-cssl.clmp.r1r2_fastp | 13.6% | 39.2% | 99.1% | 1.3% |
| Gmi-AHam_050-Ex1-cssl.clmp.r1r2_fastp | 8.7% | 44.1% | 99.1% | 1.1% |
| Gmi-AHam_051-Ex1-cssl.clmp.r1r2_fastp | 10.8% | 35.3% | 99.0% | 1.0% |
| Gmi-AHam_052-Ex1-cssl.clmp.r1r2_fastp | 14.9% | 52.5% | 98.6% | 0.9% |
| Gmi-AHam_053-Ex1-cssl.clmp.r1r2_fastp | 7.9% | 43.2% | 99.1% | 1.1% |
| Gmi-AHam_054-Ex1-cssl.clmp.r1r2_fastp | 7.0% | 42.7% | 99.2% | 1.1% |
| Gmi-AHam_056-Ex1-cssl.clmp.r1r2_fastp | 10.0% | 41.4% | 99.0% | 1.2% |
| Gmi-AHam_057-Ex1-cssl.clmp.r1r2_fastp | 9.9% | 33.7% | 98.8% | 1.1% |
| Gmi-AHam_058-Ex1-cssl.clmp.r1r2_fastp | 7.5% | 35.8% | 98.9% | 1.1% |
| Gmi-AHam_059-Ex1-cssl.clmp.r1r2_fastp | 21.2% | 31.3% | 99.1% | 1.0% |
| Gmi-AHam_061-Ex1-cssl.clmp.r1r2_fastp | 13.2% | 32.5% | 99.0% | 1.0% |
| Gmi-AHam_062-Ex1-cssl.clmp.r1r2_fastp | 8.2% | 45.3% | 99.0% | 1.1% |
| Gmi-AHam_063-Ex1-cssl.clmp.r1r2_fastp | 8.4% | 37.1% | 99.0% | 1.1% |
| Gmi-AHam_064-Ex1-cssl.clmp.r1r2_fastp | 8.5% | 40.4% | 99.0% | 1.2% |
| Gmi-AHam_066-Ex1-cssl.clmp.r1r2_fastp | 7.7% | 35.0% | 99.0% | 1.1% |
| Gmi-AHam_067-Ex1-cssl.clmp.r1r2_fastp | 11.4% | 31.0% | 99.1% | 1.0% |
| Gmi-AHam_068-Ex1-cssl.clmp.r1r2_fastp | 12.3% | 40.6% | 99.0% | 1.3% |
| Gmi-AHam_069-Ex1-cssl.clmp.r1r2_fastp | 14.1% | 30.1% | 99.1% | 1.0% |
| Gmi-AHam_070-Ex1-cssl.clmp.r1r2_fastp | 7.5% | 34.5% | 99.0% | 1.1% |
| Gmi-AHam_071-Ex1-cssl.clmp.r1r2_fastp | 19.3% | 55.5% | 98.7% | 0.8% |
| Gmi-AHam_072-Ex1-cssl.clmp.r1r2_fastp | 13.3% | 30.0% | 99.0% | 1.1% |
| Gmi-AHam_073-Ex1-cssl.clmp.r1r2_fastp | 14.3% | 32.3% | 99.2% | 0.9% |
| Gmi-AHam_074-Ex1-cssl2.clmp.r1r2_fastp | 14.9% | 31.3% | 99.0% | 1.2% |
| Gmi-AHam_075-Ex1-cssl.clmp.r1r2_fastp | 8.2% | 32.6% | 99.0% | 1.0% |
| Gmi-AHam_076-Ex1-cssl.clmp.r1r2_fastp | 7.7% | 40.4% | 99.0% | 1.2% |
| Gmi-AHam_077-Ex1-cssl.clmp.r1r2_fastp | 11.4% | 33.2% | 99.2% | 0.9% |
| Gmi-AHam_080-Ex1-cssl.clmp.r1r2_fastp | 13.7% | 32.7% | 99.0% | 1.1% |
| Gmi-AHam_081-Ex1-cssl.clmp.r1r2_fastp | 8.7% | 40.3% | 99.1% | 1.3% |
| Gmi-AHam_082-Ex1-cssl.clmp.r1r2_fastp | 8.9% | 34.2% | 99.0% | 1.0% |
| Gmi-AHam_084-Ex1-cssl.clmp.r1r2_fastp | 8.7% | 34.3% | 98.9% | 1.1% |
| Gmi-AHam_086-Ex1-cssl.clmp.r1r2_fastp | 7.6% | 40.2% | 99.1% | 1.2% |
| Gmi-AHam_087-Ex1-cssl.clmp.r1r2_fastp | 7.4% | 35.3% | 99.0% | 1.0% |
| Gmi-AHam_088-Ex1-cssl.clmp.r1r2_fastp | 7.1% | 35.9% | 99.1% | 1.0% |
| Gmi-AHam_090-Ex1-cssl.clmp.r1r2_fastp | 6.7% | 36.4% | 99.1% | 1.1% |
| Gmi-AHam_091-Ex1-cssl.clmp.r1r2_fastp | 12.2% | 48.1% | 98.7% | 1.0% |
| Gmi-AHam_092-Ex1-cssl.clmp.r1r2_fastp | 12.8% | 40.2% | 99.0% | 1.2% |
| Gmi-AHam_093-Ex1-cssl.clmp.r1r2_fastp | 9.0% | 30.4% | 99.2% | 1.0% |
| Gmi-AHam_094-Ex1-cssl.clmp.r1r2_fastp | 9.0% | 34.1% | 99.1% | 1.1% |
| Gmi-AHam_095-Ex1-cssl.clmp.r1r2_fastp | 8.0% | 32.5% | 99.0% | 1.1% |
| Gmi-AHam_096-Ex1-cssl.clmp.r1r2_fastp | 8.7% | 37.4% | 99.0% | 1.2% |
| Gmi-CBas_003-Ex1-cssl.clmp.r1r2_fastp | 25.5% | 46.9% | 98.6% | 0.4% |
| Gmi-CBas_004-Ex1-cssl.clmp.r1r2_fastp | 23.8% | 47.4% | 98.6% | 0.4% |
| Gmi-CBas_005-Ex1-cssl.clmp.r1r2_fastp | 24.4% | 47.7% | 98.6% | 0.5% |
| Gmi-CBas_006-Ex1-cssl2.clmp.r1r2_fastp | 22.7% | 47.9% | 98.6% | 0.4% |
| Gmi-CBas_007-Ex1-cssl2.clmp.r1r2_fastp | 20.6% | 47.6% | 98.7% | 0.5% |
| Gmi-CBas_009-Ex1-cssl.clmp.r1r2_fastp | 22.4% | 47.8% | 98.7% | 0.5% |
| Gmi-CBas_010-Ex1-cssl.clmp.r1r2_fastp | 24.6% | 47.4% | 98.5% | 0.5% |
| Gmi-CBas_012-Ex1-cssl2.clmp.r1r2_fastp | 20.1% | 47.6% | 98.6% | 0.4% |
| Gmi-CBas_013-Ex1-cssl2.clmp.r1r2_fastp | 21.7% | 48.3% | 98.5% | 0.4% |
| Gmi-CBas_014-Ex1-cssl2.clmp.r1r2_fastp | 21.9% | 48.3% | 98.6% | 0.5% |
| Gmi-CBas_015-Ex1-cssl2.clmp.r1r2_fastp | 18.9% | 47.4% | 98.6% | 0.4% |
| Gmi-CBas_016-Ex1-cssl2.clmp.r1r2_fastp | 20.4% | 47.8% | 98.6% | 0.4% |
| Gmi-CBas_017-Ex1-cssl2.clmp.r1r2_fastp | 19.8% | 47.5% | 98.8% | 0.4% |
| Gmi-CBas_019-Ex1-cssl2.clmp.r1r2_fastp | 20.3% | 48.1% | 98.8% | 0.5% |
| Gmi-CBas_023-Ex1-cssl2.clmp.r1r2_fastp | 17.3% | 48.1% | 98.9% | 0.5% |
| Gmi-CBas_024-Ex1-cssl2.clmp.r1r2_fastp | 21.4% | 47.3% | 98.6% | 0.3% |
| Gmi-CBas_026-Ex1-cssl2.clmp.r1r2_fastp | 20.3% | 47.6% | 98.7% | 0.4% |
| Gmi-CBas_027-Ex1-cssl2.clmp.r1r2_fastp | 19.2% | 47.9% | 98.8% | 0.5% |
| Gmi-CBas_028-Ex1-cssl.clmp.r1r2_fastp | 22.2% | 47.5% | 98.7% | 0.5% |
| Gmi-CBas_029-Ex1-cssl2.clmp.r1r2_fastp | 19.3% | 47.7% | 98.7% | 0.4% |
| Gmi-CBas_033-Ex1-cssl2.clmp.r1r2_fastp | 23.5% | 47.8% | 98.7% | 0.5% |
| Gmi-CBas_034-Ex1-cssl2.clmp.r1r2_fastp | 18.7% | 48.1% | 98.8% | 0.5% |
| Gmi-CBas_039-Ex1-cssl2.clmp.r1r2_fastp | 24.2% | 48.8% | 98.6% | 0.5% |
| Gmi-CBas_041-Ex1-cssl2.clmp.r1r2_fastp | 19.8% | 48.5% | 98.7% | 0.6% |
| Gmi-CBas_045-Ex1-cssl2.clmp.r1r2_fastp | 22.8% | 48.5% | 98.7% | 0.5% |
| Gmi-CBas_046-Ex1-cssl.clmp.r1r2_fastp | 24.7% | 48.5% | 98.5% | 0.4% |
| Gmi-CBas_047-Ex1-cssl.clmp.r1r2_fastp | 25.8% | 48.3% | 98.5% | 0.5% |
| Gmi-CBas_048-Ex1-cssl2.clmp.r1r2_fastp | 22.7% | 47.8% | 98.6% | 0.4% |
| Gmi-CBas_049-Ex1-cssl2.clmp.r1r2_fastp | 21.2% | 48.0% | 98.4% | 0.4% |
| Gmi-CBas_053-Ex1-cssl.clmp.r1r2_fastp | 25.0% | 47.6% | 98.6% | 0.5% |
| Gmi-CBas_054-Ex1-cssl2.clmp.r1r2_fastp | 23.4% | 48.5% | 98.5% | 0.5% |
| Gmi-CBas_055-Ex1-cssl.clmp.r1r2_fastp | 24.2% | 48.7% | 98.5% | 0.5% |
| Gmi-CBas_057-Ex1-cssl2.clmp.r1r2_fastp | 12.4% | 48.7% | 98.9% | 1.2% |
| Gmi-CBas_058-Ex1-cssl.clmp.r1r2_fastp | 24.1% | 47.6% | 98.6% | 0.5% |
| Gmi-CBas_060-Ex1-cssl.clmp.r1r2_fastp | 24.3% | 48.0% | 98.6% | 0.4% |
| Gmi-CBas_061-Ex1-cssl.clmp.r1r2_fastp | 25.2% | 48.2% | 98.6% | 0.6% |
| Gmi-CBas_064-Ex1-cssl2.clmp.r1r2_fastp | 17.4% | 47.5% | 98.8% | 0.4% |
| Gmi-CBas_066-Ex1-cssl2.clmp.r1r2_fastp | 19.4% | 47.9% | 98.7% | 0.5% |
| Gmi-CBas_067-Ex1-cssl.clmp.r1r2_fastp | 23.8% | 48.3% | 98.6% | 0.5% |
| Gmi-CBas_068-Ex1-cssl2.clmp.r1r2_fastp | 21.3% | 48.6% | 98.6% | 0.5% |
| Gmi-CBas_069-Ex1-cssl2.clmp.r1r2_fastp | 19.1% | 48.7% | 98.7% | 0.8% |
| Gmi-CBas_070-Ex1-cssl.clmp.r1r2_fastp | 25.0% | 48.4% | 98.4% | 0.4% |
| Gmi-CBas_071-Ex1-cssl.clmp.r1r2_fastp | 23.0% | 49.0% | 98.6% | 0.5% |
| Gmi-CBas_075-Ex1-cssl2.clmp.r1r2_fastp | 20.1% | 47.7% | 98.6% | 0.4% |
| Gmi-CBas_078-Ex1-cssl.clmp.r1r2_fastp | 24.7% | 48.6% | 98.5% | 0.5% |
| Gmi-CBas_079-Ex1-cssl.clmp.r1r2_fastp | 23.2% | 48.7% | 98.5% | 0.5% |
| Gmi-CBas_080-Ex1-cssl2.clmp.r1r2_fastp | 18.7% | 48.1% | 98.6% | 0.5% |
| Gmi-CBas_081-Ex1-cssl.clmp.r1r2_fastp | 24.9% | 47.9% | 98.5% | 0.4% |
| Gmi-CBas_082-Ex1-cssl2.clmp.r1r2_fastp | 19.8% | 48.4% | 98.5% | 0.5% |
| Gmi-CBas_083-Ex1-cssl2.clmp.r1r2_fastp | 19.5% | 47.8% | 98.8% | 0.5% |
| Gmi-CBas_084-Ex1-cssl.clmp.r1r2_fastp | 21.5% | 47.5% | 98.8% | 0.5% |
| Gmi-CBas_085-Ex1-cssl.clmp.r1r2_fastp | 18.2% | 47.7% | 98.8% | 0.8% |
| Gmi-CBas_086-Ex1-cssl2.clmp.r1r2_fastp | 29.3% | 48.3% | 98.5% | 0.3% |
| Gmi-CBas_088-Ex1-cssl.clmp.r1r2_fastp | 18.8% | 47.8% | 98.8% | 0.5% |
| Gmi-CBas_089-Ex1-cssl.clmp.r1r2_fastp | 22.3% | 48.6% | 98.6% | 0.4% |
| Gmi-CBas_090-Ex1-cssl.clmp.r1r2_fastp | 23.3% | 48.4% | 98.5% | 0.4% |
| Gmi-CBas_091-Ex1-cssl.clmp.r1r2_fastp | 22.2% | 48.3% | 98.7% | 0.4% |
| Gmi-CBas_092-Ex1-cssl2.clmp.r1r2_fastp | 20.5% | 47.5% | 98.5% | 0.5% |
| Gmi-CBas_093-Ex1-cssl.clmp.r1r2_fastp | 23.7% | 48.3% | 98.5% | 0.4% |
| Gmi-CBas_094-Ex1-cssl.clmp.r1r2_fastp | 23.1% | 49.0% | 98.5% | 0.4% |
| Gmi-CBas_095-Ex1-cssl2.clmp.r1r2_fastp | 21.9% | 47.5% | 98.5% | 0.5% |
| Gmi-CBat_001-Ex1-cssl.clmp.r1r2_fastp | 26.8% | 48.6% | 98.7% | 0.5% |
| Gmi-CBat_002-Ex1-cssl2.clmp.r1r2_fastp | 23.9% | 48.4% | 98.5% | 0.4% |
| Gmi-CBat_003-Ex1-cssl.clmp.r1r2_fastp | 26.9% | 49.2% | 98.6% | 0.5% |
| Gmi-CBat_004-Ex1-cssl.clmp.r1r2_fastp | 29.5% | 45.6% | 98.5% | 0.8% |
| Gmi-CBat_005-Ex1-cssl2.clmp.r1r2_fastp | 21.3% | 47.9% | 98.6% | 0.4% |
| Gmi-CBat_007-Ex1-cssl.clmp.r1r2_fastp | 0.0% | 0.0% | ||
| Gmi-CBat_010-Ex1-cssl.clmp.r1r2_fastp | 19.4% | 45.6% | 98.9% | 0.6% |
| Gmi-CBat_011-Ex1-cssl.clmp.r1r2_fastp | 26.7% | 49.3% | 98.6% | 0.5% |
| Gmi-CBat_012-Ex1-cssl2.clmp.r1r2_fastp | 20.8% | 47.7% | 98.5% | 0.6% |
| Gmi-CBat_013-Ex1-cssl2.clmp.r1r2_fastp | 19.2% | 47.7% | 98.6% | 0.4% |
| Gmi-CBat_015-Ex1-cssl.clmp.r1r2_fastp | 19.2% | 47.5% | 98.6% | 0.5% |
| Gmi-CBat_018-Ex1-cssl2.clmp.r1r2_fastp | 24.1% | 47.7% | 98.8% | 0.3% |
| Gmi-CBat_019-Ex1-cssl.clmp.r1r2_fastp | 18.6% | 45.0% | 98.9% | 0.9% |
| Gmi-CBat_020-Ex1-cssl.clmp.r1r2_fastp | 25.0% | 47.1% | 98.5% | 0.6% |
| Gmi-CBat_021-Ex1-cssl2.clmp.r1r2_fastp | 17.6% | 47.2% | 98.5% | 0.5% |
| Gmi-CBat_022-Ex1-cssl2.clmp.r1r2_fastp | 22.4% | 47.3% | 98.6% | 0.6% |
| Gmi-CBat_023-Ex1-cssl.clmp.r1r2_fastp | 27.4% | 47.5% | 98.7% | 0.3% |
| Gmi-CBat_024-Ex1-cssl.clmp.r1r2_fastp | 25.3% | 47.6% | 98.6% | 0.5% |
| Gmi-CBat_025-Ex1-cssl.clmp.r1r2_fastp | 21.2% | 47.3% | 98.6% | 0.6% |
| Gmi-CBat_027-Ex1-cssl.clmp.r1r2_fastp | 22.4% | 47.8% | 98.7% | 0.4% |
| Gmi-CBat_030-Ex1-cssl.clmp.r1r2_fastp | 22.6% | 47.9% | 98.7% | 0.4% |
| Gmi-CBat_031-Ex1-cssl.clmp.r1r2_fastp | 22.1% | 45.8% | 98.7% | 0.8% |
| Gmi-CBat_034-Ex1-cssl.clmp.r1r2_fastp | 22.5% | 45.1% | 98.7% | 0.8% |
| Gmi-CBat_035-Ex1-cssl2.clmp.r1r2_fastp | 20.1% | 47.4% | 98.6% | 0.6% |
| Gmi-CBat_036-Ex1-cssl2.clmp.r1r2_fastp | 21.6% | 47.7% | 98.6% | 0.4% |
| Gmi-CBat_037-Ex1-cssl2.clmp.r1r2_fastp | 20.6% | 46.8% | 98.7% | 0.5% |
| Gmi-CBat_039-Ex1-cssl.clmp.r1r2_fastp | 26.1% | 47.3% | 98.5% | 0.3% |
| Gmi-CBat_040-Ex1-cssl2.clmp.r1r2_fastp | 19.9% | 47.8% | 98.5% | 0.4% |
| Gmi-CBat_042-Ex1-cssl2.clmp.r1r2_fastp | 19.6% | 47.2% | 98.6% | 0.5% |
| Gmi-CBat_043-Ex1-cssl.clmp.r1r2_fastp | 22.1% | 47.6% | 98.6% | 0.5% |
| Gmi-CBat_044-Ex1-cssl.clmp.r1r2_fastp | 25.2% | 45.3% | 98.6% | 0.7% |
| Gmi-CBat_046-Ex1-cssl.clmp.r1r2_fastp | 17.8% | 46.6% | 98.9% | 0.5% |
| Gmi-CBat_047-Ex1-cssl2.clmp.r1r2_fastp | 20.9% | 45.3% | 98.7% | 0.9% |
| Gmi-CBat_048-Ex1-cssl.clmp.r1r2_fastp | 27.8% | 46.7% | 98.4% | 0.4% |
| Gmi-CBat_049-Ex1-cssl.clmp.r1r2_fastp | 21.8% | 44.9% | 98.8% | 0.9% |
| Gmi-CBat_050-Ex1-cssl.clmp.r1r2_fastp | 22.4% | 45.8% | 98.7% | 0.8% |
| Gmi-CBat_051-Ex1-cssl2.clmp.r1r2_fastp | 17.3% | 47.1% | 98.7% | 0.5% |
| Gmi-CBat_052-Ex1-cssl.clmp.r1r2_fastp | 22.4% | 47.5% | 98.7% | 0.5% |
| Gmi-CBat_056-Ex1-cssl.clmp.r1r2_fastp | 22.9% | 47.5% | 98.8% | 0.4% |
| Gmi-CBat_058-Ex1-cssl2.clmp.r1r2_fastp | 17.6% | 46.1% | 98.4% | 0.2% |
| Gmi-CBat_059-Ex1-cssl.clmp.r1r2_fastp | 22.6% | 47.2% | 98.8% | 0.2% |
| Gmi-CBat_060-Ex1-cssl.clmp.r1r2_fastp | 21.7% | 46.9% | 98.5% | 0.3% |
| Gmi-CBat_061-Ex1-cssl2.clmp.r1r2_fastp | 20.4% | 46.4% | 98.5% | 0.5% |
| Gmi-CBat_062-Ex1-cssl2.clmp.r1r2_fastp | 22.4% | 47.0% | 98.7% | 0.5% |
| Gmi-CBat_063-Ex1-cssl.clmp.r1r2_fastp | 21.6% | 46.7% | 98.9% | 0.3% |
| Gmi-CBat_064-Ex1-cssl.clmp.r1r2_fastp | 23.5% | 47.2% | 98.7% | 0.8% |
| Gmi-CBat_065-Ex1-cssl.clmp.r1r2_fastp | 24.5% | 43.5% | 98.9% | 0.8% |
| Gmi-CBat_066-Ex1-cssl2.clmp.r1r2_fastp | 20.3% | 47.8% | 98.6% | 0.4% |
| Gmi-CBat_067-Ex1-cssl.clmp.r1r2_fastp | 20.9% | 47.4% | 98.7% | 0.5% |
| Gmi-CBat_070-Ex1-cssl2.clmp.r1r2_fastp | 19.8% | 47.5% | 98.6% | 0.4% |
| Gmi-CBat_071-Ex1-cssl2.clmp.r1r2_fastp | 18.5% | 45.3% | 98.7% | 0.8% |
| Gmi-CBat_076-Ex1-cssl.clmp.r1r2_fastp | 20.0% | 47.8% | 98.6% | 0.4% |
| Gmi-CBat_079-Ex1-cssl.clmp.r1r2_fastp | 18.0% | 45.6% | 98.7% | 0.5% |
| Gmi-CBat_080-Ex1-cssl2.clmp.r1r2_fastp | 19.8% | 47.8% | 98.6% | 0.4% |
| Gmi-CBat_081-Ex1-cssl2.clmp.r1r2_fastp | 20.0% | 47.1% | 98.8% | 0.3% |
| Gmi-CBat_082-Ex1-cssl2.clmp.r1r2_fastp | 20.5% | 47.8% | 98.6% | 0.4% |
| Gmi-CBat_083-Ex1-cssl.clmp.r1r2_fastp | 24.6% | 49.0% | 98.6% | 0.4% |
| Gmi-CBat_084-Ex1-cssl.clmp.r1r2_fastp | 24.0% | 45.9% | 98.6% | 0.5% |
| Gmi-CBat_088-Ex1-cssl.clmp.r1r2_fastp | 22.4% | 46.2% | 98.7% | 0.6% |
| Gmi-CBat_091-Ex1-cssl.clmp.r1r2_fastp | 24.4% | 45.2% | 98.7% | 0.9% |
| Gmi-CBat_093-Ex1-cssl2.clmp.r1r2_fastp | 21.2% | 47.4% | 98.5% | 0.4% |
| Gmi-CBat_094-Ex1-cssl2.clmp.r1r2_fastp | 17.1% | 47.1% | 98.6% | 0.5% |
| Gmi-CBat_095-Ex1-cssl2.clmp.r1r2_fastp | 21.1% | 47.0% | 98.6% | 0.7% |
| Gmi-CBat_096-Ex1-cssl2.clmp.r1r2_fastp | 19.4% | 44.6% | 98.7% | 0.9% |
fastp
fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...).DOI: 10.1093/bioinformatics/bty560.
Filtered Reads
Filtering statistics of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Duplication Rates
Duplication rates of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Insert Sizes
Insert size estimation of sampled reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Sequence Quality
Average sequencing quality over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
GC Content
Average GC content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
N content
Average N content over each base of all reads.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
