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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.13

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        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2022-11-17, 16:42 EST based on data in: /home/e1garcia/shotgun_PIRE/pire_cssl_data_processing/gazza_minuta/2nd_sequencing_run/fq_fp1_clmp_fp2


        General Statistics

        Showing 245/245 rows and 4/6 columns.
        Sample Name% DuplicationGC content% PF% Adapter
        Gmi-ABas_001-Ex1-b-cssl2.clmp.r1r2_fastp
        16.0%
        52.4%
        98.6%
        1.0%
        Gmi-ABas_003-Ex1-b-cssl2.clmp.r1r2_fastp
        10.1%
        48.3%
        98.9%
        1.1%
        Gmi-ABas_004-Ex1-b-cssl2.clmp.r1r2_fastp
        11.0%
        50.6%
        98.9%
        1.1%
        Gmi-ABas_008-Ex1-b-cssl.clmp.r1r2_fastp
        22.9%
        68.0%
        98.6%
        0.3%
        Gmi-ABas_009-Ex1-b-cssl.clmp.r1r2_fastp
        8.5%
        46.9%
        99.0%
        1.0%
        Gmi-ABas_010-Ex1-b-cssl.clmp.r1r2_fastp
        9.2%
        46.7%
        99.0%
        1.0%
        Gmi-ABas_011-Ex1-b-cssl.clmp.r1r2_fastp
        13.8%
        52.4%
        98.8%
        0.9%
        Gmi-ABas_012-Ex1-b-cssl.clmp.r1r2_fastp
        10.8%
        49.0%
        98.8%
        1.1%
        Gmi-ABas_013-Ex1-b-cssl.clmp.r1r2_fastp
        15.7%
        49.3%
        98.8%
        0.9%
        Gmi-ABas_014-Ex1-b-cssl.clmp.r1r2_fastp
        9.7%
        47.5%
        98.8%
        1.2%
        Gmi-ABas_015-Ex1-b-cssl.clmp.r1r2_fastp
        10.6%
        46.4%
        98.9%
        1.1%
        Gmi-ABas_016-Ex1-b-cssl.clmp.r1r2_fastp
        15.0%
        50.2%
        98.8%
        0.9%
        Gmi-ABas_017-Ex1-b-cssl2.clmp.r1r2_fastp
        8.3%
        45.2%
        98.9%
        1.1%
        Gmi-ABas_018-Ex1-b-cssl2.clmp.r1r2_fastp
        7.3%
        42.9%
        99.0%
        1.1%
        Gmi-ABas_019-Ex1-b-cssl2.clmp.r1r2_fastp
        7.6%
        44.3%
        99.1%
        1.2%
        Gmi-ABas_022-Ex1-b-cssl2.clmp.r1r2_fastp
        6.9%
        42.7%
        99.1%
        1.2%
        Gmi-ABas_024-Ex1-b-cssl.clmp.r1r2_fastp
        10.3%
        47.4%
        98.8%
        1.1%
        Gmi-ABas_025-Ex1-b-cssl.clmp.r1r2_fastp
        7.9%
        44.0%
        98.6%
        1.5%
        Gmi-ABas_026-Ex1-b-cssl.clmp.r1r2_fastp
        12.4%
        46.2%
        98.1%
        1.4%
        Gmi-ABas_027-Ex1-b-cssl.clmp.r1r2_fastp
        11.7%
        45.4%
        98.0%
        1.4%
        Gmi-ABas_028-Ex1-b-cssl2.clmp.r1r2_fastp
        10.2%
        44.5%
        98.3%
        1.3%
        Gmi-ABas_029-Ex1-b-cssl.clmp.r1r2_fastp
        12.9%
        46.7%
        98.1%
        1.3%
        Gmi-ABas_030-Ex1-b-cssl2.clmp.r1r2_fastp
        15.3%
        48.6%
        98.2%
        1.2%
        Gmi-ABas_031-Ex1-b-cssl.clmp.r1r2_fastp
        12.2%
        46.4%
        98.1%
        1.5%
        Gmi-ABas_032-Ex1-b-cssl.clmp.r1r2_fastp
        12.2%
        46.4%
        98.4%
        1.4%
        Gmi-ABas_033-Ex1-b-cssl2.clmp.r1r2_fastp
        11.8%
        46.2%
        98.3%
        1.6%
        Gmi-ABas_034-Ex1-b-cssl2.clmp.r1r2_fastp
        8.4%
        44.4%
        98.4%
        1.7%
        Gmi-ABas_035-Ex1-b-cssl2.clmp.r1r2_fastp
        17.9%
        50.3%
        98.4%
        1.1%
        Gmi-ABas_036-Ex1-b-cssl.clmp.r1r2_fastp
        10.7%
        45.2%
        98.5%
        1.3%
        Gmi-ABas_037-Ex1-b-cssl.clmp.r1r2_fastp
        9.3%
        44.3%
        98.4%
        1.4%
        Gmi-ABas_038-Ex1-b-cssl.clmp.r1r2_fastp
        12.4%
        47.7%
        98.5%
        1.4%
        Gmi-ABas_039-Ex1-b-cssl.clmp.r1r2_fastp
        13.6%
        47.4%
        98.5%
        1.3%
        Gmi-ABas_040-Ex1-b-cssl.clmp.r1r2_fastp
        11.8%
        45.3%
        98.3%
        1.6%
        Gmi-ABas_041-Ex1-b-cssl.clmp.r1r2_fastp
        14.0%
        46.8%
        98.3%
        1.5%
        Gmi-ABas_042-Ex1-b-cssl.clmp.r1r2_fastp
        9.8%
        44.2%
        98.4%
        1.5%
        Gmi-ABas_043-Ex1-b-cssl.clmp.r1r2_fastp
        14.3%
        46.5%
        98.4%
        1.3%
        Gmi-ABas_045-Ex1-b-cssl2.clmp.r1r2_fastp
        9.2%
        28.7%
        99.0%
        1.1%
        Gmi-ABas_046-Ex1-b-cssl.clmp.r1r2_fastp
        11.7%
        45.9%
        98.5%
        1.3%
        Gmi-ABas_047-Ex1-b-cssl2.clmp.r1r2_fastp
        8.4%
        43.2%
        98.4%
        1.5%
        Gmi-ABas_048-Ex1-b-cssl.clmp.r1r2_fastp
        14.3%
        47.4%
        98.3%
        1.4%
        Gmi-ABas_049-Ex1-b-cssl2.clmp.r1r2_fastp
        10.7%
        29.4%
        98.8%
        1.1%
        Gmi-ABas_050-Ex1-b-cssl.clmp.r1r2_fastp
        14.9%
        45.5%
        98.1%
        1.4%
        Gmi-ABas_051-Ex1-b-cssl.clmp.r1r2_fastp
        15.2%
        46.0%
        98.1%
        1.4%
        Gmi-ABas_052-Ex1-b-cssl.clmp.r1r2_fastp
        14.1%
        45.0%
        98.1%
        1.4%
        Gmi-ABas_053-Ex1-b-cssl.clmp.r1r2_fastp
        10.7%
        43.7%
        98.1%
        1.5%
        Gmi-ABas_055-Ex1-b-cssl2.clmp.r1r2_fastp
        13.4%
        44.9%
        98.2%
        1.4%
        Gmi-ABas_056-Ex1-b-cssl.clmp.r1r2_fastp
        10.8%
        44.2%
        98.1%
        1.6%
        Gmi-ABas_057-Ex1-b-cssl.clmp.r1r2_fastp
        15.6%
        46.7%
        98.1%
        1.5%
        Gmi-ABas_058-Ex1-b-cssl2.clmp.r1r2_fastp
        9.1%
        43.8%
        98.3%
        1.7%
        Gmi-ABas_059-Ex1-b-cssl2.clmp.r1r2_fastp
        8.6%
        44.7%
        98.2%
        1.7%
        Gmi-ABas_060-Ex1-b-cssl2.clmp.r1r2_fastp
        8.3%
        40.7%
        98.4%
        1.5%
        Gmi-ABas_061-Ex1-b-cssl.clmp.r1r2_fastp
        10.1%
        45.5%
        98.2%
        1.6%
        Gmi-AHam_001-Ex1-cssl2.clmp.r1r2_fastp
        8.1%
        45.7%
        99.0%
        0.9%
        Gmi-AHam_002-Ex1-cssl2.clmp.r1r2_fastp
        11.7%
        49.0%
        98.6%
        1.0%
        Gmi-AHam_005-Ex1-cssl.clmp.r1r2_fastp
        12.8%
        50.9%
        98.9%
        1.0%
        Gmi-AHam_006-Ex1-cssl.clmp.r1r2_fastp
        11.7%
        30.3%
        99.1%
        1.0%
        Gmi-AHam_007-Ex1-cssl.clmp.r1r2_fastp
        15.0%
        40.2%
        99.1%
        1.3%
        Gmi-AHam_008-Ex1-cssl.clmp.r1r2_fastp
        8.2%
        33.0%
        99.1%
        1.1%
        Gmi-AHam_009-Ex1-cssl.clmp.r1r2_fastp
        8.6%
        37.2%
        98.9%
        1.1%
        Gmi-AHam_012-Ex1-cssl.clmp.r1r2_fastp
        8.5%
        47.0%
        99.0%
        1.1%
        Gmi-AHam_013-Ex1-cssl2.clmp.r1r2_fastp
        11.8%
        45.1%
        98.7%
        1.0%
        Gmi-AHam_015-Ex1-cssl2.clmp.r1r2_fastp
        20.6%
        42.0%
        98.8%
        0.8%
        Gmi-AHam_016-Ex1-cssl2.clmp.r1r2_fastp
        9.3%
        39.8%
        99.1%
        1.2%
        Gmi-AHam_019-Ex1-cssl.clmp.r1r2_fastp
        8.3%
        43.5%
        99.1%
        1.1%
        Gmi-AHam_020-Ex1-cssl.clmp.r1r2_fastp
        7.5%
        44.5%
        99.1%
        1.2%
        Gmi-AHam_021-Ex1-cssl.clmp.r1r2_fastp
        9.2%
        43.7%
        99.0%
        1.1%
        Gmi-AHam_022-Ex1-cssl.clmp.r1r2_fastp
        7.9%
        44.1%
        99.1%
        0.9%
        Gmi-AHam_023-Ex1-cssl.clmp.r1r2_fastp
        13.2%
        51.3%
        98.8%
        0.9%
        Gmi-AHam_024-Ex1-cssl.clmp.r1r2_fastp
        9.9%
        40.2%
        99.1%
        1.2%
        Gmi-AHam_025-Ex1-cssl.clmp.r1r2_fastp
        7.4%
        43.0%
        99.1%
        1.1%
        Gmi-AHam_034-Ex1-cssl.clmp.r1r2_fastp
        15.7%
        42.0%
        99.0%
        1.2%
        Gmi-AHam_036-Ex1-cssl.clmp.r1r2_fastp
        10.0%
        40.5%
        99.0%
        1.3%
        Gmi-AHam_038-Ex1-cssl.clmp.r1r2_fastp
        7.4%
        43.8%
        99.1%
        1.1%
        Gmi-AHam_040-Ex1-cssl.clmp.r1r2_fastp
        8.9%
        32.3%
        98.9%
        1.1%
        Gmi-AHam_043-Ex1-cssl.clmp.r1r2_fastp
        7.0%
        34.3%
        99.1%
        1.1%
        Gmi-AHam_044-Ex1-cssl.clmp.r1r2_fastp
        8.4%
        41.0%
        99.1%
        1.3%
        Gmi-AHam_045-Ex1-cssl.clmp.r1r2_fastp
        8.4%
        40.3%
        99.0%
        1.3%
        Gmi-AHam_046-Ex1-cssl.clmp.r1r2_fastp
        8.2%
        40.0%
        99.1%
        1.2%
        Gmi-AHam_047-Ex1-cssl.clmp.r1r2_fastp
        12.6%
        31.0%
        99.1%
        1.0%
        Gmi-AHam_048-Ex1-cssl.clmp.r1r2_fastp
        13.6%
        39.0%
        99.1%
        1.3%
        Gmi-AHam_049-Ex1-cssl.clmp.r1r2_fastp
        13.6%
        39.2%
        99.1%
        1.3%
        Gmi-AHam_050-Ex1-cssl.clmp.r1r2_fastp
        8.7%
        44.1%
        99.1%
        1.1%
        Gmi-AHam_051-Ex1-cssl.clmp.r1r2_fastp
        10.8%
        35.3%
        99.0%
        1.0%
        Gmi-AHam_052-Ex1-cssl.clmp.r1r2_fastp
        14.9%
        52.5%
        98.6%
        0.9%
        Gmi-AHam_053-Ex1-cssl.clmp.r1r2_fastp
        7.9%
        43.2%
        99.1%
        1.1%
        Gmi-AHam_054-Ex1-cssl.clmp.r1r2_fastp
        7.0%
        42.7%
        99.2%
        1.1%
        Gmi-AHam_056-Ex1-cssl.clmp.r1r2_fastp
        10.0%
        41.4%
        99.0%
        1.2%
        Gmi-AHam_057-Ex1-cssl.clmp.r1r2_fastp
        9.9%
        33.7%
        98.8%
        1.1%
        Gmi-AHam_058-Ex1-cssl.clmp.r1r2_fastp
        7.5%
        35.8%
        98.9%
        1.1%
        Gmi-AHam_059-Ex1-cssl.clmp.r1r2_fastp
        21.2%
        31.3%
        99.1%
        1.0%
        Gmi-AHam_061-Ex1-cssl.clmp.r1r2_fastp
        13.2%
        32.5%
        99.0%
        1.0%
        Gmi-AHam_062-Ex1-cssl.clmp.r1r2_fastp
        8.2%
        45.3%
        99.0%
        1.1%
        Gmi-AHam_063-Ex1-cssl.clmp.r1r2_fastp
        8.4%
        37.1%
        99.0%
        1.1%
        Gmi-AHam_064-Ex1-cssl.clmp.r1r2_fastp
        8.5%
        40.4%
        99.0%
        1.2%
        Gmi-AHam_066-Ex1-cssl.clmp.r1r2_fastp
        7.7%
        35.0%
        99.0%
        1.1%
        Gmi-AHam_067-Ex1-cssl.clmp.r1r2_fastp
        11.4%
        31.0%
        99.1%
        1.0%
        Gmi-AHam_068-Ex1-cssl.clmp.r1r2_fastp
        12.3%
        40.6%
        99.0%
        1.3%
        Gmi-AHam_069-Ex1-cssl.clmp.r1r2_fastp
        14.1%
        30.1%
        99.1%
        1.0%
        Gmi-AHam_070-Ex1-cssl.clmp.r1r2_fastp
        7.5%
        34.5%
        99.0%
        1.1%
        Gmi-AHam_071-Ex1-cssl.clmp.r1r2_fastp
        19.3%
        55.5%
        98.7%
        0.8%
        Gmi-AHam_072-Ex1-cssl.clmp.r1r2_fastp
        13.3%
        30.0%
        99.0%
        1.1%
        Gmi-AHam_073-Ex1-cssl.clmp.r1r2_fastp
        14.3%
        32.3%
        99.2%
        0.9%
        Gmi-AHam_074-Ex1-cssl2.clmp.r1r2_fastp
        14.9%
        31.3%
        99.0%
        1.2%
        Gmi-AHam_075-Ex1-cssl.clmp.r1r2_fastp
        8.2%
        32.6%
        99.0%
        1.0%
        Gmi-AHam_076-Ex1-cssl.clmp.r1r2_fastp
        7.7%
        40.4%
        99.0%
        1.2%
        Gmi-AHam_077-Ex1-cssl.clmp.r1r2_fastp
        11.4%
        33.2%
        99.2%
        0.9%
        Gmi-AHam_080-Ex1-cssl.clmp.r1r2_fastp
        13.7%
        32.7%
        99.0%
        1.1%
        Gmi-AHam_081-Ex1-cssl.clmp.r1r2_fastp
        8.7%
        40.3%
        99.1%
        1.3%
        Gmi-AHam_082-Ex1-cssl.clmp.r1r2_fastp
        8.9%
        34.2%
        99.0%
        1.0%
        Gmi-AHam_084-Ex1-cssl.clmp.r1r2_fastp
        8.7%
        34.3%
        98.9%
        1.1%
        Gmi-AHam_086-Ex1-cssl.clmp.r1r2_fastp
        7.6%
        40.2%
        99.1%
        1.2%
        Gmi-AHam_087-Ex1-cssl.clmp.r1r2_fastp
        7.4%
        35.3%
        99.0%
        1.0%
        Gmi-AHam_088-Ex1-cssl.clmp.r1r2_fastp
        7.1%
        35.9%
        99.1%
        1.0%
        Gmi-AHam_090-Ex1-cssl.clmp.r1r2_fastp
        6.7%
        36.4%
        99.1%
        1.1%
        Gmi-AHam_091-Ex1-cssl.clmp.r1r2_fastp
        12.2%
        48.1%
        98.7%
        1.0%
        Gmi-AHam_092-Ex1-cssl.clmp.r1r2_fastp
        12.8%
        40.2%
        99.0%
        1.2%
        Gmi-AHam_093-Ex1-cssl.clmp.r1r2_fastp
        9.0%
        30.4%
        99.2%
        1.0%
        Gmi-AHam_094-Ex1-cssl.clmp.r1r2_fastp
        9.0%
        34.1%
        99.1%
        1.1%
        Gmi-AHam_095-Ex1-cssl.clmp.r1r2_fastp
        8.0%
        32.5%
        99.0%
        1.1%
        Gmi-AHam_096-Ex1-cssl.clmp.r1r2_fastp
        8.7%
        37.4%
        99.0%
        1.2%
        Gmi-CBas_003-Ex1-cssl.clmp.r1r2_fastp
        25.5%
        46.9%
        98.6%
        0.4%
        Gmi-CBas_004-Ex1-cssl.clmp.r1r2_fastp
        23.8%
        47.4%
        98.6%
        0.4%
        Gmi-CBas_005-Ex1-cssl.clmp.r1r2_fastp
        24.4%
        47.7%
        98.6%
        0.5%
        Gmi-CBas_006-Ex1-cssl2.clmp.r1r2_fastp
        22.7%
        47.9%
        98.6%
        0.4%
        Gmi-CBas_007-Ex1-cssl2.clmp.r1r2_fastp
        20.6%
        47.6%
        98.7%
        0.5%
        Gmi-CBas_009-Ex1-cssl.clmp.r1r2_fastp
        22.4%
        47.8%
        98.7%
        0.5%
        Gmi-CBas_010-Ex1-cssl.clmp.r1r2_fastp
        24.6%
        47.4%
        98.5%
        0.5%
        Gmi-CBas_012-Ex1-cssl2.clmp.r1r2_fastp
        20.1%
        47.6%
        98.6%
        0.4%
        Gmi-CBas_013-Ex1-cssl2.clmp.r1r2_fastp
        21.7%
        48.3%
        98.5%
        0.4%
        Gmi-CBas_014-Ex1-cssl2.clmp.r1r2_fastp
        21.9%
        48.3%
        98.6%
        0.5%
        Gmi-CBas_015-Ex1-cssl2.clmp.r1r2_fastp
        18.9%
        47.4%
        98.6%
        0.4%
        Gmi-CBas_016-Ex1-cssl2.clmp.r1r2_fastp
        20.4%
        47.8%
        98.6%
        0.4%
        Gmi-CBas_017-Ex1-cssl2.clmp.r1r2_fastp
        19.8%
        47.5%
        98.8%
        0.4%
        Gmi-CBas_019-Ex1-cssl2.clmp.r1r2_fastp
        20.3%
        48.1%
        98.8%
        0.5%
        Gmi-CBas_023-Ex1-cssl2.clmp.r1r2_fastp
        17.3%
        48.1%
        98.9%
        0.5%
        Gmi-CBas_024-Ex1-cssl2.clmp.r1r2_fastp
        21.4%
        47.3%
        98.6%
        0.3%
        Gmi-CBas_026-Ex1-cssl2.clmp.r1r2_fastp
        20.3%
        47.6%
        98.7%
        0.4%
        Gmi-CBas_027-Ex1-cssl2.clmp.r1r2_fastp
        19.2%
        47.9%
        98.8%
        0.5%
        Gmi-CBas_028-Ex1-cssl.clmp.r1r2_fastp
        22.2%
        47.5%
        98.7%
        0.5%
        Gmi-CBas_029-Ex1-cssl2.clmp.r1r2_fastp
        19.3%
        47.7%
        98.7%
        0.4%
        Gmi-CBas_033-Ex1-cssl2.clmp.r1r2_fastp
        23.5%
        47.8%
        98.7%
        0.5%
        Gmi-CBas_034-Ex1-cssl2.clmp.r1r2_fastp
        18.7%
        48.1%
        98.8%
        0.5%
        Gmi-CBas_039-Ex1-cssl2.clmp.r1r2_fastp
        24.2%
        48.8%
        98.6%
        0.5%
        Gmi-CBas_041-Ex1-cssl2.clmp.r1r2_fastp
        19.8%
        48.5%
        98.7%
        0.6%
        Gmi-CBas_045-Ex1-cssl2.clmp.r1r2_fastp
        22.8%
        48.5%
        98.7%
        0.5%
        Gmi-CBas_046-Ex1-cssl.clmp.r1r2_fastp
        24.7%
        48.5%
        98.5%
        0.4%
        Gmi-CBas_047-Ex1-cssl.clmp.r1r2_fastp
        25.8%
        48.3%
        98.5%
        0.5%
        Gmi-CBas_048-Ex1-cssl2.clmp.r1r2_fastp
        22.7%
        47.8%
        98.6%
        0.4%
        Gmi-CBas_049-Ex1-cssl2.clmp.r1r2_fastp
        21.2%
        48.0%
        98.4%
        0.4%
        Gmi-CBas_053-Ex1-cssl.clmp.r1r2_fastp
        25.0%
        47.6%
        98.6%
        0.5%
        Gmi-CBas_054-Ex1-cssl2.clmp.r1r2_fastp
        23.4%
        48.5%
        98.5%
        0.5%
        Gmi-CBas_055-Ex1-cssl.clmp.r1r2_fastp
        24.2%
        48.7%
        98.5%
        0.5%
        Gmi-CBas_057-Ex1-cssl2.clmp.r1r2_fastp
        12.4%
        48.7%
        98.9%
        1.2%
        Gmi-CBas_058-Ex1-cssl.clmp.r1r2_fastp
        24.1%
        47.6%
        98.6%
        0.5%
        Gmi-CBas_060-Ex1-cssl.clmp.r1r2_fastp
        24.3%
        48.0%
        98.6%
        0.4%
        Gmi-CBas_061-Ex1-cssl.clmp.r1r2_fastp
        25.2%
        48.2%
        98.6%
        0.6%
        Gmi-CBas_064-Ex1-cssl2.clmp.r1r2_fastp
        17.4%
        47.5%
        98.8%
        0.4%
        Gmi-CBas_066-Ex1-cssl2.clmp.r1r2_fastp
        19.4%
        47.9%
        98.7%
        0.5%
        Gmi-CBas_067-Ex1-cssl.clmp.r1r2_fastp
        23.8%
        48.3%
        98.6%
        0.5%
        Gmi-CBas_068-Ex1-cssl2.clmp.r1r2_fastp
        21.3%
        48.6%
        98.6%
        0.5%
        Gmi-CBas_069-Ex1-cssl2.clmp.r1r2_fastp
        19.1%
        48.7%
        98.7%
        0.8%
        Gmi-CBas_070-Ex1-cssl.clmp.r1r2_fastp
        25.0%
        48.4%
        98.4%
        0.4%
        Gmi-CBas_071-Ex1-cssl.clmp.r1r2_fastp
        23.0%
        49.0%
        98.6%
        0.5%
        Gmi-CBas_075-Ex1-cssl2.clmp.r1r2_fastp
        20.1%
        47.7%
        98.6%
        0.4%
        Gmi-CBas_078-Ex1-cssl.clmp.r1r2_fastp
        24.7%
        48.6%
        98.5%
        0.5%
        Gmi-CBas_079-Ex1-cssl.clmp.r1r2_fastp
        23.2%
        48.7%
        98.5%
        0.5%
        Gmi-CBas_080-Ex1-cssl2.clmp.r1r2_fastp
        18.7%
        48.1%
        98.6%
        0.5%
        Gmi-CBas_081-Ex1-cssl.clmp.r1r2_fastp
        24.9%
        47.9%
        98.5%
        0.4%
        Gmi-CBas_082-Ex1-cssl2.clmp.r1r2_fastp
        19.8%
        48.4%
        98.5%
        0.5%
        Gmi-CBas_083-Ex1-cssl2.clmp.r1r2_fastp
        19.5%
        47.8%
        98.8%
        0.5%
        Gmi-CBas_084-Ex1-cssl.clmp.r1r2_fastp
        21.5%
        47.5%
        98.8%
        0.5%
        Gmi-CBas_085-Ex1-cssl.clmp.r1r2_fastp
        18.2%
        47.7%
        98.8%
        0.8%
        Gmi-CBas_086-Ex1-cssl2.clmp.r1r2_fastp
        29.3%
        48.3%
        98.5%
        0.3%
        Gmi-CBas_088-Ex1-cssl.clmp.r1r2_fastp
        18.8%
        47.8%
        98.8%
        0.5%
        Gmi-CBas_089-Ex1-cssl.clmp.r1r2_fastp
        22.3%
        48.6%
        98.6%
        0.4%
        Gmi-CBas_090-Ex1-cssl.clmp.r1r2_fastp
        23.3%
        48.4%
        98.5%
        0.4%
        Gmi-CBas_091-Ex1-cssl.clmp.r1r2_fastp
        22.2%
        48.3%
        98.7%
        0.4%
        Gmi-CBas_092-Ex1-cssl2.clmp.r1r2_fastp
        20.5%
        47.5%
        98.5%
        0.5%
        Gmi-CBas_093-Ex1-cssl.clmp.r1r2_fastp
        23.7%
        48.3%
        98.5%
        0.4%
        Gmi-CBas_094-Ex1-cssl.clmp.r1r2_fastp
        23.1%
        49.0%
        98.5%
        0.4%
        Gmi-CBas_095-Ex1-cssl2.clmp.r1r2_fastp
        21.9%
        47.5%
        98.5%
        0.5%
        Gmi-CBat_001-Ex1-cssl.clmp.r1r2_fastp
        26.8%
        48.6%
        98.7%
        0.5%
        Gmi-CBat_002-Ex1-cssl2.clmp.r1r2_fastp
        23.9%
        48.4%
        98.5%
        0.4%
        Gmi-CBat_003-Ex1-cssl.clmp.r1r2_fastp
        26.9%
        49.2%
        98.6%
        0.5%
        Gmi-CBat_004-Ex1-cssl.clmp.r1r2_fastp
        29.5%
        45.6%
        98.5%
        0.8%
        Gmi-CBat_005-Ex1-cssl2.clmp.r1r2_fastp
        21.3%
        47.9%
        98.6%
        0.4%
        Gmi-CBat_007-Ex1-cssl.clmp.r1r2_fastp
        0.0%
        0.0%
        Gmi-CBat_010-Ex1-cssl.clmp.r1r2_fastp
        19.4%
        45.6%
        98.9%
        0.6%
        Gmi-CBat_011-Ex1-cssl.clmp.r1r2_fastp
        26.7%
        49.3%
        98.6%
        0.5%
        Gmi-CBat_012-Ex1-cssl2.clmp.r1r2_fastp
        20.8%
        47.7%
        98.5%
        0.6%
        Gmi-CBat_013-Ex1-cssl2.clmp.r1r2_fastp
        19.2%
        47.7%
        98.6%
        0.4%
        Gmi-CBat_015-Ex1-cssl.clmp.r1r2_fastp
        19.2%
        47.5%
        98.6%
        0.5%
        Gmi-CBat_018-Ex1-cssl2.clmp.r1r2_fastp
        24.1%
        47.7%
        98.8%
        0.3%
        Gmi-CBat_019-Ex1-cssl.clmp.r1r2_fastp
        18.6%
        45.0%
        98.9%
        0.9%
        Gmi-CBat_020-Ex1-cssl.clmp.r1r2_fastp
        25.0%
        47.1%
        98.5%
        0.6%
        Gmi-CBat_021-Ex1-cssl2.clmp.r1r2_fastp
        17.6%
        47.2%
        98.5%
        0.5%
        Gmi-CBat_022-Ex1-cssl2.clmp.r1r2_fastp
        22.4%
        47.3%
        98.6%
        0.6%
        Gmi-CBat_023-Ex1-cssl.clmp.r1r2_fastp
        27.4%
        47.5%
        98.7%
        0.3%
        Gmi-CBat_024-Ex1-cssl.clmp.r1r2_fastp
        25.3%
        47.6%
        98.6%
        0.5%
        Gmi-CBat_025-Ex1-cssl.clmp.r1r2_fastp
        21.2%
        47.3%
        98.6%
        0.6%
        Gmi-CBat_027-Ex1-cssl.clmp.r1r2_fastp
        22.4%
        47.8%
        98.7%
        0.4%
        Gmi-CBat_030-Ex1-cssl.clmp.r1r2_fastp
        22.6%
        47.9%
        98.7%
        0.4%
        Gmi-CBat_031-Ex1-cssl.clmp.r1r2_fastp
        22.1%
        45.8%
        98.7%
        0.8%
        Gmi-CBat_034-Ex1-cssl.clmp.r1r2_fastp
        22.5%
        45.1%
        98.7%
        0.8%
        Gmi-CBat_035-Ex1-cssl2.clmp.r1r2_fastp
        20.1%
        47.4%
        98.6%
        0.6%
        Gmi-CBat_036-Ex1-cssl2.clmp.r1r2_fastp
        21.6%
        47.7%
        98.6%
        0.4%
        Gmi-CBat_037-Ex1-cssl2.clmp.r1r2_fastp
        20.6%
        46.8%
        98.7%
        0.5%
        Gmi-CBat_039-Ex1-cssl.clmp.r1r2_fastp
        26.1%
        47.3%
        98.5%
        0.3%
        Gmi-CBat_040-Ex1-cssl2.clmp.r1r2_fastp
        19.9%
        47.8%
        98.5%
        0.4%
        Gmi-CBat_042-Ex1-cssl2.clmp.r1r2_fastp
        19.6%
        47.2%
        98.6%
        0.5%
        Gmi-CBat_043-Ex1-cssl.clmp.r1r2_fastp
        22.1%
        47.6%
        98.6%
        0.5%
        Gmi-CBat_044-Ex1-cssl.clmp.r1r2_fastp
        25.2%
        45.3%
        98.6%
        0.7%
        Gmi-CBat_046-Ex1-cssl.clmp.r1r2_fastp
        17.8%
        46.6%
        98.9%
        0.5%
        Gmi-CBat_047-Ex1-cssl2.clmp.r1r2_fastp
        20.9%
        45.3%
        98.7%
        0.9%
        Gmi-CBat_048-Ex1-cssl.clmp.r1r2_fastp
        27.8%
        46.7%
        98.4%
        0.4%
        Gmi-CBat_049-Ex1-cssl.clmp.r1r2_fastp
        21.8%
        44.9%
        98.8%
        0.9%
        Gmi-CBat_050-Ex1-cssl.clmp.r1r2_fastp
        22.4%
        45.8%
        98.7%
        0.8%
        Gmi-CBat_051-Ex1-cssl2.clmp.r1r2_fastp
        17.3%
        47.1%
        98.7%
        0.5%
        Gmi-CBat_052-Ex1-cssl.clmp.r1r2_fastp
        22.4%
        47.5%
        98.7%
        0.5%
        Gmi-CBat_056-Ex1-cssl.clmp.r1r2_fastp
        22.9%
        47.5%
        98.8%
        0.4%
        Gmi-CBat_058-Ex1-cssl2.clmp.r1r2_fastp
        17.6%
        46.1%
        98.4%
        0.2%
        Gmi-CBat_059-Ex1-cssl.clmp.r1r2_fastp
        22.6%
        47.2%
        98.8%
        0.2%
        Gmi-CBat_060-Ex1-cssl.clmp.r1r2_fastp
        21.7%
        46.9%
        98.5%
        0.3%
        Gmi-CBat_061-Ex1-cssl2.clmp.r1r2_fastp
        20.4%
        46.4%
        98.5%
        0.5%
        Gmi-CBat_062-Ex1-cssl2.clmp.r1r2_fastp
        22.4%
        47.0%
        98.7%
        0.5%
        Gmi-CBat_063-Ex1-cssl.clmp.r1r2_fastp
        21.6%
        46.7%
        98.9%
        0.3%
        Gmi-CBat_064-Ex1-cssl.clmp.r1r2_fastp
        23.5%
        47.2%
        98.7%
        0.8%
        Gmi-CBat_065-Ex1-cssl.clmp.r1r2_fastp
        24.5%
        43.5%
        98.9%
        0.8%
        Gmi-CBat_066-Ex1-cssl2.clmp.r1r2_fastp
        20.3%
        47.8%
        98.6%
        0.4%
        Gmi-CBat_067-Ex1-cssl.clmp.r1r2_fastp
        20.9%
        47.4%
        98.7%
        0.5%
        Gmi-CBat_070-Ex1-cssl2.clmp.r1r2_fastp
        19.8%
        47.5%
        98.6%
        0.4%
        Gmi-CBat_071-Ex1-cssl2.clmp.r1r2_fastp
        18.5%
        45.3%
        98.7%
        0.8%
        Gmi-CBat_076-Ex1-cssl.clmp.r1r2_fastp
        20.0%
        47.8%
        98.6%
        0.4%
        Gmi-CBat_079-Ex1-cssl.clmp.r1r2_fastp
        18.0%
        45.6%
        98.7%
        0.5%
        Gmi-CBat_080-Ex1-cssl2.clmp.r1r2_fastp
        19.8%
        47.8%
        98.6%
        0.4%
        Gmi-CBat_081-Ex1-cssl2.clmp.r1r2_fastp
        20.0%
        47.1%
        98.8%
        0.3%
        Gmi-CBat_082-Ex1-cssl2.clmp.r1r2_fastp
        20.5%
        47.8%
        98.6%
        0.4%
        Gmi-CBat_083-Ex1-cssl.clmp.r1r2_fastp
        24.6%
        49.0%
        98.6%
        0.4%
        Gmi-CBat_084-Ex1-cssl.clmp.r1r2_fastp
        24.0%
        45.9%
        98.6%
        0.5%
        Gmi-CBat_088-Ex1-cssl.clmp.r1r2_fastp
        22.4%
        46.2%
        98.7%
        0.6%
        Gmi-CBat_091-Ex1-cssl.clmp.r1r2_fastp
        24.4%
        45.2%
        98.7%
        0.9%
        Gmi-CBat_093-Ex1-cssl2.clmp.r1r2_fastp
        21.2%
        47.4%
        98.5%
        0.4%
        Gmi-CBat_094-Ex1-cssl2.clmp.r1r2_fastp
        17.1%
        47.1%
        98.6%
        0.5%
        Gmi-CBat_095-Ex1-cssl2.clmp.r1r2_fastp
        21.1%
        47.0%
        98.6%
        0.7%
        Gmi-CBat_096-Ex1-cssl2.clmp.r1r2_fastp
        19.4%
        44.6%
        98.7%
        0.9%

        fastp

        fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...).DOI: 10.1093/bioinformatics/bty560.

        Filtered Reads

        Filtering statistics of sampled reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Duplication Rates

        Duplication rates of sampled reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Insert Sizes

        Insert size estimation of sampled reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Quality

        Average sequencing quality over each base of all reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        GC Content

        Average GC content over each base of all reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        N content

        Average N content over each base of all reads.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).